{
  "_id": "6a16d00facfb0bcc41d8a8bf",
  "Package": "opalr",
  "Version": "3.6.1",
  "Title": "'Opal' Data Repository Client and 'DataSHIELD' Utils",
  "Authors@R": "c(person(given = \"Yannick\",\nfamily = \"Marcon\",\nrole = c(\"aut\", \"cre\"),\nemail = \"yannick.marcon@obiba.org\",\ncomment = c(ORCID = \"0000-0003-0138-2023\")),\nperson(given = \"Amadou\",\nfamily = \"Gaye\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0002-1180-2792\")),\nperson(\"OBiBa group\",\nrole=\"cph\",\nemail=\"info@obiba.org\"))",
  "Description": "Data integration Web application for biobanks by 'OBiBa'.\n'Opal' is the core database application for biobanks.\nParticipant data, once collected from any data source, must be\nintegrated and stored in a central data repository under a\nuniform model. 'Opal' is such a central repository. It can\nimport, process, validate, query, analyze, report, and export\ndata. 'Opal' is typically used in a research center to analyze\nthe data acquired at assessment centres. Its ultimate purpose\nis to achieve seamless data-sharing among biobanks. This 'Opal'\nclient allows to interact with 'Opal' web services and to\nperform operations on the R server side. 'DataSHIELD'\nadministration tools are also provided.",
  "License": "GPL-3",
  "URL": "https://github.com/obiba/opalr/, https://www.obiba.org/opalr/,\nhttps://www.obiba.org/pages/products/opal/,\nhttps://academic.oup.com/ije/article/46/5/1372/4102813,\nhttps://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008880,\nhttps://datashield.org/",
  "BugReports": "https://github.com/obiba/opalr/issues",
  "VignetteBuilder": "knitr",
  "Encoding": "UTF-8",
  "Config/roxygen2/version": "8.0.0",
  "Config/pak/sysreqs": "make libicu-dev libssl-dev libx11-dev zlib1g-dev",
  "Repository": "https://obiba.r-universe.dev",
  "Date/Publication": "2026-05-27 07:59:49 UTC",
  "RemoteUrl": "https://github.com/obiba/opalr",
  "RemoteRef": "HEAD",
  "RemoteSha": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-27 11:00:55 UTC",
    "User": "root"
  },
  "Author": "Yannick Marcon [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-0138-2023>),\nAmadou Gaye [ctb] (ORCID: <https://orcid.org/0000-0002-1180-2792>),\nOBiBa group [cph]",
  "Maintainer": "Yannick Marcon <yannick.marcon@obiba.org>",
  "MD5sum": "834b6dca152d9ca01829c0f280fc3fd4",
  "_user": "obiba",
  "_type": "src",
  "_file": "opalr_3.6.1.tar.gz",
  "_fileid": "956004137455c6ab8c303bfa3e96189edd13c9c34427c74796ac0d5badeebe02",
  "_filesize": 627634,
  "_sha256": "956004137455c6ab8c303bfa3e96189edd13c9c34427c74796ac0d5badeebe02",
  "_created": "2026-05-27T11:00:55.000Z",
  "_published": "2026-05-27T11:05:51.606Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78062519440,
      "time": 149,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7238711923"
    },
    {
      "job": 78062519505,
      "time": 248,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7238741976"
    },
    {
      "job": 78062519424,
      "time": 101,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7238696514"
    },
    {
      "job": 78062519439,
      "time": 108,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7238698766"
    },
    {
      "job": 78062025692,
      "time": 186,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7238663166"
    },
    {
      "job": 78062519492,
      "time": 109,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7238699091"
    },
    {
      "job": 78062519446,
      "time": 125,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7238703939"
    },
    {
      "job": 78062519447,
      "time": 112,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7238700094"
    },
    {
      "job": 78062519453,
      "time": 109,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7238699521"
    }
  ],
  "_buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/obiba/opalr",
  "_commit": {
    "id": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
    "author": "Yannick Marcon <yannick.marcon@obiba.org>",
    "committer": "Yannick Marcon <yannick.marcon@obiba.org>",
    "message": "chore: updated website\n",
    "time": 1779868789
  },
  "_maintainer": {
    "name": "Yannick Marcon",
    "email": "yannick.marcon@obiba.org",
    "login": "ymarcon",
    "description": "",
    "uuid": 2581149,
    "orcid": "0000-0003-0138-2023"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.1",
      "role": "Depends"
    },
    {
      "package": "httr",
      "role": "Depends"
    },
    {
      "package": "jsonlite",
      "role": "Imports"
    },
    {
      "package": "readr",
      "role": "Imports"
    },
    {
      "package": "mime",
      "role": "Imports"
    },
    {
      "package": "progress",
      "role": "Imports"
    },
    {
      "package": "labelled",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "e1071",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "knitrBootstrap",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "obiba",
  "_selfowned": true,
  "_usedby": 3,
  "_updates": [
    {
      "week": "2025-39",
      "n": 3
    },
    {
      "week": "2025-40",
      "n": 1
    },
    {
      "week": "2025-41",
      "n": 2
    },
    {
      "week": "2025-42",
      "n": 2
    },
    {
      "week": "2025-43",
      "n": 1
    },
    {
      "week": "2025-45",
      "n": 2
    },
    {
      "week": "2025-46",
      "n": 5
    },
    {
      "week": "2025-50",
      "n": 4
    },
    {
      "week": "2026-16",
      "n": 2
    },
    {
      "week": "2026-22",
      "n": 3
    }
  ],
  "_tags": [
    {
      "name": "3.5.0",
      "date": "2025-11-05"
    },
    {
      "name": "3.5.1",
      "date": "2025-11-16"
    },
    {
      "name": "3.5.2",
      "date": "2025-12-10"
    },
    {
      "name": "3.6.0",
      "date": "2026-04-19"
    },
    {
      "name": "3.6.1",
      "date": "2026-05-27"
    }
  ],
  "_stars": 3,
  "_contributors": [
    {
      "user": "ymarcon",
      "count": 456,
      "uuid": 2581149
    },
    {
      "user": "bananemure",
      "count": 7,
      "uuid": 6589067
    },
    {
      "user": "kazoompa",
      "count": 2,
      "uuid": 2814716
    },
    {
      "user": "villegar",
      "count": 1,
      "uuid": 5126692
    },
    {
      "user": "meek0",
      "count": 1,
      "uuid": 6180385
    }
  ],
  "_userbio": {
    "uuid": 2547522,
    "type": "organization",
    "name": "Open Source Software for Epidemiology"
  },
  "_downloads": {
    "count": 924,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/opalr"
  },
  "_devurl": "https://github.com/obiba/opalr",
  "_pkgdown": "https://www.obiba.org/opalr/",
  "_searchresults": 213,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/opalr.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/obiba/opalr",
  "_realowner": "obiba",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2019-02-18"
    },
    {
      "version": "1.0.1",
      "date": "2019-02-26"
    },
    {
      "version": "1.0.2",
      "date": "2019-03-19"
    },
    {
      "version": "1.0.3",
      "date": "2019-03-21"
    },
    {
      "version": "1.1.0",
      "date": "2019-06-26"
    },
    {
      "version": "1.2.0",
      "date": "2019-08-19"
    },
    {
      "version": "1.3.0",
      "date": "2019-12-10"
    },
    {
      "version": "1.4.0",
      "date": "2020-05-18"
    },
    {
      "version": "1.4.1",
      "date": "2020-06-08"
    },
    {
      "version": "1.5.0",
      "date": "2020-11-03"
    },
    {
      "version": "1.5.1",
      "date": "2020-12-16"
    },
    {
      "version": "1.5.2",
      "date": "2021-01-21"
    },
    {
      "version": "2.0.0",
      "date": "2021-03-09"
    },
    {
      "version": "2.1.0",
      "date": "2021-04-29"
    },
    {
      "version": "2.1.1",
      "date": "2021-05-31"
    },
    {
      "version": "3.0.0",
      "date": "2021-07-05"
    },
    {
      "version": "3.0.1",
      "date": "2021-08-23"
    },
    {
      "version": "3.0.2",
      "date": "2021-10-26"
    },
    {
      "version": "3.1.0",
      "date": "2022-05-02"
    },
    {
      "version": "3.1.1",
      "date": "2022-06-09"
    },
    {
      "version": "3.2.0",
      "date": "2022-10-13"
    },
    {
      "version": "3.3.0",
      "date": "2023-02-03"
    },
    {
      "version": "3.3.1",
      "date": "2023-02-28"
    },
    {
      "version": "3.4.0",
      "date": "2023-10-06"
    },
    {
      "version": "3.4.1",
      "date": "2024-01-10"
    },
    {
      "version": "3.4.2",
      "date": "2024-09-18"
    },
    {
      "version": "3.5.0",
      "date": "2025-11-05"
    },
    {
      "version": "3.5.1",
      "date": "2025-11-16"
    },
    {
      "version": "3.5.2",
      "date": "2025-12-11"
    },
    {
      "version": "3.6.0",
      "date": "2026-04-17"
    },
    {
      "version": "3.6.1",
      "date": "2026-05-27"
    }
  ],
  "_exports": [
    "dictionary.annotate",
    "dictionary.annotate.harmo_status",
    "dictionary.annotations",
    "dictionary.apply",
    "dictionary.inspect",
    "dsadmin.activity",
    "dsadmin.activity_summary",
    "dsadmin.get_method",
    "dsadmin.get_methods",
    "dsadmin.get_options",
    "dsadmin.install_github_package",
    "dsadmin.install_local_package",
    "dsadmin.install_package",
    "dsadmin.installed_package",
    "dsadmin.log",
    "dsadmin.package_description",
    "dsadmin.package_descriptions",
    "dsadmin.perm",
    "dsadmin.perm_add",
    "dsadmin.perm_delete",
    "dsadmin.profile",
    "dsadmin.profile_access",
    "dsadmin.profile_create",
    "dsadmin.profile_delete",
    "dsadmin.profile_enable",
    "dsadmin.profile_exists",
    "dsadmin.profile_init",
    "dsadmin.profile_perm",
    "dsadmin.profile_perm_add",
    "dsadmin.profile_perm_delete",
    "dsadmin.profile_rparser",
    "dsadmin.profiles",
    "dsadmin.publish_package",
    "dsadmin.remove_package",
    "dsadmin.rm_method",
    "dsadmin.rm_methods",
    "dsadmin.rm_option",
    "dsadmin.rm_options",
    "dsadmin.rm_package_methods",
    "dsadmin.set_method",
    "dsadmin.set_option",
    "dsadmin.set_package_methods",
    "dsadmin.unpublish_package",
    "oadmin.activity",
    "oadmin.activity_summary",
    "oadmin.install_bioconductor_package",
    "oadmin.install_cran_package",
    "oadmin.install_devtools",
    "oadmin.install_github_package",
    "oadmin.install_local_package",
    "oadmin.install_package",
    "oadmin.installed_devtools",
    "oadmin.installed_package",
    "oadmin.installed_packages",
    "oadmin.log",
    "oadmin.log_rest",
    "oadmin.log_sql",
    "oadmin.package_description",
    "oadmin.perm",
    "oadmin.perm_add",
    "oadmin.perm_delete",
    "oadmin.r_perm",
    "oadmin.r_perm_add",
    "oadmin.r_perm_delete",
    "oadmin.remove_package",
    "oadmin.system_metrics",
    "oadmin.system_perm",
    "oadmin.system_perm_add",
    "oadmin.system_perm_delete",
    "oadmin.user_add",
    "oadmin.user_delete",
    "oadmin.user_enable",
    "oadmin.user_exists",
    "oadmin.user_profile_delete",
    "oadmin.user_profiles",
    "oadmin.user_reset_password",
    "oadmin.users",
    "opal.annotate",
    "opal.annotations",
    "opal.as_md_table",
    "opal.assign",
    "opal.assign.data",
    "opal.assign.resource",
    "opal.assign.script",
    "opal.assign.table",
    "opal.assign.table.tibble",
    "opal.attribute_values",
    "opal.command",
    "opal.command_result",
    "opal.command_rm",
    "opal.commands",
    "opal.commands_rm",
    "opal.datasource",
    "opal.datasources",
    "opal.delete",
    "opal.execute",
    "opal.execute.source",
    "opal.file",
    "opal.file_cp",
    "opal.file_download",
    "opal.file_info",
    "opal.file_ls",
    "opal.file_mkdir",
    "opal.file_mkdir_tmp",
    "opal.file_mv",
    "opal.file_read",
    "opal.file_rm",
    "opal.file_unzip",
    "opal.file_upload",
    "opal.file_write",
    "opal.get",
    "opal.load_package",
    "opal.login",
    "opal.logout",
    "opal.perms",
    "opal.post",
    "opal.profiles",
    "opal.project",
    "opal.project_backup",
    "opal.project_command",
    "opal.project_create",
    "opal.project_delete",
    "opal.project_exists",
    "opal.project_perm",
    "opal.project_perm_add",
    "opal.project_perm_delete",
    "opal.project_restore",
    "opal.projects",
    "opal.projects_databases",
    "opal.put",
    "opal.report",
    "opal.resource",
    "opal.resource_create",
    "opal.resource_delete",
    "opal.resource_exists",
    "opal.resource_extension_create",
    "opal.resource_get",
    "opal.resource_perm",
    "opal.resource_perm_add",
    "opal.resource_perm_delete",
    "opal.resource_view_create",
    "opal.resource_view_reconnect",
    "opal.resources",
    "opal.resources_perm",
    "opal.resources_perm_add",
    "opal.resources_perm_delete",
    "opal.rm",
    "opal.session",
    "opal.session_delete",
    "opal.session_events",
    "opal.session_exists",
    "opal.session_get",
    "opal.session_running",
    "opal.sql",
    "opal.sql_history",
    "opal.symbol_import",
    "opal.symbol_rm",
    "opal.symbol_save",
    "opal.symbols",
    "opal.table",
    "opal.table_create",
    "opal.table_delete",
    "opal.table_dictionary_get",
    "opal.table_dictionary_update",
    "opal.table_exists",
    "opal.table_export",
    "opal.table_get",
    "opal.table_import",
    "opal.table_perm",
    "opal.table_perm_add",
    "opal.table_perm_delete",
    "opal.table_save",
    "opal.table_truncate",
    "opal.table_view_create",
    "opal.table_view_update",
    "opal.tables",
    "opal.tables_perm",
    "opal.tables_perm_add",
    "opal.tables_perm_delete",
    "opal.task",
    "opal.task_cancel",
    "opal.task_delete",
    "opal.task_wait",
    "opal.tasks",
    "opal.taxonomies",
    "opal.taxonomy",
    "opal.taxonomy_delete",
    "opal.taxonomy_download",
    "opal.taxonomy_upload",
    "opal.terms",
    "opal.token",
    "opal.token_datashield_create",
    "opal.token_delete",
    "opal.token_r_create",
    "opal.token_renew",
    "opal.token_sql_create",
    "opal.tokens",
    "opal.unload_package",
    "opal.valueset",
    "opal.variable",
    "opal.variable_summary",
    "opal.variables",
    "opal.version_compare",
    "opal.vocabularies",
    "opal.vocabulary",
    "opal.workspace_restore",
    "opal.workspace_rm",
    "opal.workspace_save",
    "opal.workspaces"
  ],
  "_help": [
    {
      "page": "dictionary.annotate",
      "title": "Set variable annotation with a taxonomy term",
      "topics": [
        "dictionary.annotate"
      ]
    },
    {
      "page": "dictionary.annotate.harmo_status",
      "title": "Set variable annotation with Harmonization Status term",
      "topics": [
        "dictionary.annotate.harmo_status"
      ]
    },
    {
      "page": "dictionary.annotations",
      "title": "List the annotations",
      "topics": [
        "dictionary.annotations"
      ]
    },
    {
      "page": "dictionary.apply",
      "title": "Apply the dictionary to a tibble",
      "topics": [
        "dictionary.apply"
      ]
    },
    {
      "page": "dictionary.inspect",
      "title": "Inspect the dictionary of a tibble",
      "topics": [
        "dictionary.inspect"
      ]
    },
    {
      "page": "dsadmin.activity",
      "title": "Get DataSHIELD activity",
      "topics": [
        "dsadmin.activity"
      ]
    },
    {
      "page": "dsadmin.activity_summary",
      "title": "Get DataSHIELD activity summary",
      "topics": [
        "dsadmin.activity_summary"
      ]
    },
    {
      "page": "dsadmin.get_method",
      "title": "Get a DataSHIELD method",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.get_method"
      ]
    },
    {
      "page": "dsadmin.get_methods",
      "title": "Get DataSHIELD methods",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.get_methods"
      ]
    },
    {
      "page": "dsadmin.get_options",
      "title": "Get the DataSHIELD options",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.get_options"
      ]
    },
    {
      "page": "dsadmin.install_github_package",
      "title": "Install a DataSHIELD package from GitHub",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.install_github_package"
      ]
    },
    {
      "page": "dsadmin.install_local_package",
      "title": "Install a DataSHIELD package from a local archive file",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.install_local_package"
      ]
    },
    {
      "page": "dsadmin.install_package",
      "title": "Install a DataSHIELD package",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.install_package"
      ]
    },
    {
      "page": "dsadmin.installed_package",
      "title": "Check DataSHIELD package",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.installed_package"
      ]
    },
    {
      "page": "dsadmin.log",
      "title": "Get DataSHIELD logs",
      "topics": [
        "dsadmin.log"
      ]
    },
    {
      "page": "dsadmin.package_description",
      "title": "Get DataSHIELD package description",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.package_description"
      ]
    },
    {
      "page": "dsadmin.package_descriptions",
      "title": "Get DataSHIELD package descriptions",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.package_descriptions"
      ]
    },
    {
      "page": "dsadmin.perm",
      "title": "Get the DataSHIELD permissions",
      "topics": [
        "dsadmin.perm"
      ]
    },
    {
      "page": "dsadmin.perm_add",
      "title": "Add or update a DataSHIELD permission",
      "topics": [
        "dsadmin.perm_add"
      ]
    },
    {
      "page": "dsadmin.perm_delete",
      "title": "Delete a DataSHIELD permission",
      "topics": [
        "dsadmin.perm_delete"
      ]
    },
    {
      "page": "dsadmin.profile",
      "title": "Get a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile"
      ]
    },
    {
      "page": "dsadmin.profile_access",
      "title": "Restrict or open access to a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_access"
      ]
    },
    {
      "page": "dsadmin.profile_create",
      "title": "Create a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_create"
      ]
    },
    {
      "page": "dsadmin.profile_delete",
      "title": "Delete a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_delete"
      ]
    },
    {
      "page": "dsadmin.profile_enable",
      "title": "Enable or disable a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_enable"
      ]
    },
    {
      "page": "dsadmin.profile_exists",
      "title": "Check a DataSHIELD profile exists",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_exists"
      ]
    },
    {
      "page": "dsadmin.profile_init",
      "title": "Initialize a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_init"
      ]
    },
    {
      "page": "dsadmin.profile_perm",
      "title": "Get the permissions of a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_perm"
      ]
    },
    {
      "page": "dsadmin.profile_perm_add",
      "title": "Add or update a permission on a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_perm_add"
      ]
    },
    {
      "page": "dsadmin.profile_perm_delete",
      "title": "Delete a permission from a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_perm_delete"
      ]
    },
    {
      "page": "dsadmin.profile_rparser",
      "title": "Set or remove the R parser version of a DataSHIELD profile",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profile_rparser"
      ]
    },
    {
      "page": "dsadmin.profiles",
      "title": "Get DataSHIELD profiles",
      "concept": [
        "DataSHIELD profiles"
      ],
      "topics": [
        "dsadmin.profiles"
      ]
    },
    {
      "page": "dsadmin.publish_package",
      "title": "Publish DataSHIELD package settings",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.publish_package"
      ]
    },
    {
      "page": "dsadmin.remove_package",
      "title": "Remove DataSHIELD package",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.remove_package"
      ]
    },
    {
      "page": "dsadmin.rm_method",
      "title": "Remove DataSHIELD method",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.rm_method"
      ]
    },
    {
      "page": "dsadmin.rm_methods",
      "title": "Remove DataSHIELD methods.",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.rm_methods"
      ]
    },
    {
      "page": "dsadmin.rm_option",
      "title": "Remove a DataSHIELD option",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.rm_option"
      ]
    },
    {
      "page": "dsadmin.rm_options",
      "title": "Remove all DataSHIELD options",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.rm_options"
      ]
    },
    {
      "page": "dsadmin.rm_package_methods",
      "title": "Remove DataSHIELD package methods",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.rm_package_methods"
      ]
    },
    {
      "page": "dsadmin.set_method",
      "title": "Set DataSHIELD method",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.set_method"
      ]
    },
    {
      "page": "dsadmin.set_option",
      "title": "Set DataSHIELD option",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.set_option"
      ]
    },
    {
      "page": "dsadmin.set_package_methods",
      "title": "Set DataSHIELD package methods",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.set_package_methods"
      ]
    },
    {
      "page": "dsadmin.unpublish_package",
      "title": "Unpublish DataSHIELD package settings",
      "concept": [
        "DataSHIELD functions"
      ],
      "topics": [
        "dsadmin.unpublish_package"
      ]
    },
    {
      "page": "oadmin.activity",
      "title": "Get R activity",
      "topics": [
        "oadmin.activity"
      ]
    },
    {
      "page": "oadmin.activity_summary",
      "title": "Get R activity summary",
      "topics": [
        "oadmin.activity_summary"
      ]
    },
    {
      "page": "oadmin.install_bioconductor_package",
      "title": "Install a package from Bioconductor",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.install_bioconductor_package"
      ]
    },
    {
      "page": "oadmin.install_cran_package",
      "title": "Install a package from CRAN",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.install_cran_package"
      ]
    },
    {
      "page": "oadmin.install_devtools",
      "title": "Install devtools package",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.install_devtools"
      ]
    },
    {
      "page": "oadmin.install_github_package",
      "title": "Install a package from GitHub",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.install_github_package"
      ]
    },
    {
      "page": "oadmin.install_local_package",
      "title": "Install a package from a local archive file",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.install_local_package"
      ]
    },
    {
      "page": "oadmin.install_package",
      "title": "Install CRAN package",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.install_package"
      ]
    },
    {
      "page": "oadmin.installed_devtools",
      "title": "Check devtools package",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.installed_devtools"
      ]
    },
    {
      "page": "oadmin.installed_package",
      "title": "Check package is installed",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.installed_package"
      ]
    },
    {
      "page": "oadmin.installed_packages",
      "title": "List installed packages",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.installed_packages"
      ]
    },
    {
      "page": "oadmin.log",
      "title": "Get Opal main logs",
      "topics": [
        "oadmin.log"
      ]
    },
    {
      "page": "oadmin.log_rest",
      "title": "Get Opal REST API logs",
      "topics": [
        "oadmin.log_rest"
      ]
    },
    {
      "page": "oadmin.log_sql",
      "title": "Get Opal SQL API logs",
      "topics": [
        "oadmin.log_sql"
      ]
    },
    {
      "page": "oadmin.package_description",
      "title": "Get package description",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.package_description"
      ]
    },
    {
      "page": "oadmin.perm",
      "title": "Get the R permissions (deprecated)",
      "topics": [
        "oadmin.perm"
      ]
    },
    {
      "page": "oadmin.perm_add",
      "title": "Add or update a R permission (deprecated)",
      "topics": [
        "oadmin.perm_add"
      ]
    },
    {
      "page": "oadmin.perm_delete",
      "title": "Delete a R permission (deprecated)",
      "topics": [
        "oadmin.perm_delete"
      ]
    },
    {
      "page": "oadmin.r_perm",
      "title": "Get the R permissions",
      "topics": [
        "oadmin.r_perm"
      ]
    },
    {
      "page": "oadmin.r_perm_add",
      "title": "Add or update a R permission",
      "topics": [
        "oadmin.r_perm_add"
      ]
    },
    {
      "page": "oadmin.r_perm_delete",
      "title": "Delete a R permission",
      "topics": [
        "oadmin.r_perm_delete"
      ]
    },
    {
      "page": "oadmin.remove_package",
      "title": "Remove package",
      "concept": [
        "administration functions"
      ],
      "topics": [
        "oadmin.remove_package"
      ]
    },
    {
      "page": "oadmin.system_metrics",
      "title": "Get system metrics",
      "topics": [
        "oadmin.system_metrics"
      ]
    },
    {
      "page": "oadmin.system_perm",
      "title": "Get the System permissions",
      "topics": [
        "oadmin.system_perm"
      ]
    },
    {
      "page": "oadmin.system_perm_add",
      "title": "Add or update a System permission",
      "topics": [
        "oadmin.system_perm_add"
      ]
    },
    {
      "page": "oadmin.system_perm_delete",
      "title": "Delete a System permission",
      "topics": [
        "oadmin.system_perm_delete"
      ]
    },
    {
      "page": "oadmin.user_add",
      "title": "Add a user",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_add"
      ]
    },
    {
      "page": "oadmin.user_delete",
      "title": "Delete a user",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_delete"
      ]
    },
    {
      "page": "oadmin.user_enable",
      "title": "Enable a user",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_enable"
      ]
    },
    {
      "page": "oadmin.user_exists",
      "title": "Check user exists",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_exists"
      ]
    },
    {
      "page": "oadmin.user_profile_delete",
      "title": "Delete a user profile",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_profile_delete"
      ]
    },
    {
      "page": "oadmin.user_profiles",
      "title": "Get user profiles",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_profiles"
      ]
    },
    {
      "page": "oadmin.user_reset_password",
      "title": "Reset user password",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.user_reset_password"
      ]
    },
    {
      "page": "oadmin.users",
      "title": "Get the users",
      "concept": [
        "user functions"
      ],
      "topics": [
        "oadmin.users"
      ]
    },
    {
      "page": "opal.annotate",
      "title": "Apply the annotations to a Opal table",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.annotate"
      ]
    },
    {
      "page": "opal.annotations",
      "title": "Get the annotations of a Opal table",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.annotations"
      ]
    },
    {
      "page": "opal.as_md_table",
      "title": "Array to Markdown",
      "topics": [
        "opal.as_md_table"
      ]
    },
    {
      "page": "opal.assign",
      "title": "Data or expression assignment",
      "concept": [
        "assignment functions"
      ],
      "topics": [
        "opal.assign"
      ]
    },
    {
      "page": "opal.assign.data",
      "title": "Data assignment",
      "concept": [
        "assignment functions"
      ],
      "topics": [
        "opal.assign.data"
      ]
    },
    {
      "page": "opal.assign.resource",
      "title": "Resource assignment",
      "concept": [
        "assignment functions"
      ],
      "topics": [
        "opal.assign.resource"
      ]
    },
    {
      "page": "opal.assign.script",
      "title": "R script assignment",
      "concept": [
        "assignment functions"
      ],
      "topics": [
        "opal.assign.script"
      ]
    },
    {
      "page": "opal.assign.table",
      "title": "Data assignment to a data.frame",
      "concept": [
        "assignment functions"
      ],
      "topics": [
        "opal.assign.table"
      ]
    },
    {
      "page": "opal.assign.table.tibble",
      "title": "Data assignment to a tibble",
      "concept": [
        "assignment functions"
      ],
      "topics": [
        "opal.assign.table.tibble"
      ]
    },
    {
      "page": "opal.attribute_values",
      "title": "Get a vector of attribute values",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.attribute_values"
      ]
    },
    {
      "page": "opal.command",
      "title": "Get an asynchronous command",
      "concept": [
        "command functions"
      ],
      "topics": [
        "opal.command"
      ]
    },
    {
      "page": "opal.command_result",
      "title": "Get result of an asynchronous command",
      "concept": [
        "command functions"
      ],
      "topics": [
        "opal.command_result"
      ]
    },
    {
      "page": "opal.command_rm",
      "title": "Remove an asynchronous command",
      "concept": [
        "command functions"
      ],
      "topics": [
        "opal.command_rm"
      ]
    },
    {
      "page": "opal.commands",
      "title": "List the asynchronous commands",
      "concept": [
        "command functions"
      ],
      "topics": [
        "opal.commands"
      ]
    },
    {
      "page": "opal.commands_rm",
      "title": "Remove all asynchronous commands",
      "concept": [
        "command functions"
      ],
      "topics": [
        "opal.commands_rm"
      ]
    },
    {
      "page": "opal.datasource",
      "title": "Get a datasource",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.datasource"
      ]
    },
    {
      "page": "opal.datasources",
      "title": "Get datasources",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.datasources"
      ]
    },
    {
      "page": "opal.delete",
      "title": "Generic REST resource deletion.",
      "concept": [
        "REST functions"
      ],
      "topics": [
        "opal.delete"
      ]
    },
    {
      "page": "opal.execute",
      "title": "Execute a R script",
      "concept": [
        "execution functions"
      ],
      "topics": [
        "opal.execute"
      ]
    },
    {
      "page": "opal.execute.source",
      "title": "Execute a R file script",
      "concept": [
        "execution functions"
      ],
      "topics": [
        "opal.execute.source"
      ]
    },
    {
      "page": "opal.file",
      "title": "Get file content",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file"
      ]
    },
    {
      "page": "opal.file_cp",
      "title": "Copy a file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_cp"
      ]
    },
    {
      "page": "opal.file_download",
      "title": "Download a file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_download"
      ]
    },
    {
      "page": "opal.file_info",
      "title": "Get file information",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_info"
      ]
    },
    {
      "page": "opal.file_ls",
      "title": "List content of a folder",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_ls"
      ]
    },
    {
      "page": "opal.file_mkdir",
      "title": "Make a folder",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_mkdir"
      ]
    },
    {
      "page": "opal.file_mkdir_tmp",
      "title": "Make a temporary folder",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_mkdir_tmp"
      ]
    },
    {
      "page": "opal.file_mv",
      "title": "Move and/or rename a file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_mv"
      ]
    },
    {
      "page": "opal.file_read",
      "title": "Read a file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_read"
      ]
    },
    {
      "page": "opal.file_rm",
      "title": "Remove a file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_rm"
      ]
    },
    {
      "page": "opal.file_unzip",
      "title": "Unzip a zip archive file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_unzip"
      ]
    },
    {
      "page": "opal.file_upload",
      "title": "Upload a file or a folder",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_upload"
      ]
    },
    {
      "page": "opal.file_write",
      "title": "Write a file",
      "concept": [
        "file functions"
      ],
      "topics": [
        "opal.file_write"
      ]
    },
    {
      "page": "opal.get",
      "title": "Generic REST resource getter.",
      "concept": [
        "REST functions"
      ],
      "topics": [
        "opal.get"
      ]
    },
    {
      "page": "opal.load_package",
      "title": "Load package",
      "concept": [
        "execution functions"
      ],
      "topics": [
        "opal.load_package"
      ]
    },
    {
      "page": "opal.login",
      "title": "Opal login",
      "concept": [
        "connection functions"
      ],
      "topics": [
        "opal.login"
      ]
    },
    {
      "page": "opal.logout",
      "title": "Logout from Opal(s)",
      "concept": [
        "connection functions"
      ],
      "topics": [
        "opal.logout"
      ]
    },
    {
      "page": "opal.perms",
      "title": "Get the permissions of a subject",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.perms"
      ]
    },
    {
      "page": "opal.post",
      "title": "Generic REST resource creation.",
      "concept": [
        "REST functions"
      ],
      "topics": [
        "opal.post"
      ]
    },
    {
      "page": "opal.profiles",
      "title": "List R profiles",
      "concept": [
        "connection functions"
      ],
      "topics": [
        "opal.profiles"
      ]
    },
    {
      "page": "opal.project",
      "title": "Get a project",
      "concept": [
        "project functions"
      ],
      "topics": [
        "opal.project"
      ]
    },
    {
      "page": "opal.project_backup",
      "title": "Backup a project",
      "topics": [
        "opal.project_backup"
      ]
    },
    {
      "page": "opal.project_command",
      "title": "Get project task",
      "topics": [
        "opal.project_command"
      ]
    },
    {
      "page": "opal.project_create",
      "title": "Create a project",
      "concept": [
        "project functions"
      ],
      "topics": [
        "opal.project_create"
      ]
    },
    {
      "page": "opal.project_delete",
      "title": "Delete a project",
      "concept": [
        "project functions"
      ],
      "topics": [
        "opal.project_delete"
      ]
    },
    {
      "page": "opal.project_exists",
      "title": "Check a project exists",
      "concept": [
        "project functions"
      ],
      "topics": [
        "opal.project_exists"
      ]
    },
    {
      "page": "opal.project_perm",
      "title": "Get the permissions on a project",
      "topics": [
        "opal.project_perm"
      ]
    },
    {
      "page": "opal.project_perm_add",
      "title": "Add or update a permission on a project",
      "topics": [
        "opal.project_perm_add"
      ]
    },
    {
      "page": "opal.project_perm_delete",
      "title": "Delete a permission from a project",
      "topics": [
        "opal.project_perm_delete"
      ]
    },
    {
      "page": "opal.project_restore",
      "title": "Restore a project",
      "topics": [
        "opal.project_restore"
      ]
    },
    {
      "page": "opal.projects",
      "title": "Get projects",
      "concept": [
        "project functions"
      ],
      "topics": [
        "opal.projects"
      ]
    },
    {
      "page": "opal.projects_databases",
      "title": "Get projects databases",
      "concept": [
        "project functions"
      ],
      "topics": [
        "opal.projects_databases"
      ]
    },
    {
      "page": "opal.put",
      "title": "Generic REST resource update.",
      "concept": [
        "REST functions"
      ],
      "topics": [
        "opal.put"
      ]
    },
    {
      "page": "opal.report",
      "title": "Opal report",
      "topics": [
        "opal.report"
      ]
    },
    {
      "page": "opal.resource",
      "title": "Get a resource reference of a project",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource"
      ]
    },
    {
      "page": "opal.resource_create",
      "title": "Create a resource reference in a project",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_create"
      ]
    },
    {
      "page": "opal.resource_delete",
      "title": "Delete a resource reference",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_delete"
      ]
    },
    {
      "page": "opal.resource_exists",
      "title": "Check a resource reference exists",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_exists"
      ]
    },
    {
      "page": "opal.resource_extension_create",
      "title": "Create an extended resource reference in a project",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_extension_create"
      ]
    },
    {
      "page": "opal.resource_get",
      "title": "Get the resource object of a project",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_get"
      ]
    },
    {
      "page": "opal.resource_perm",
      "title": "Get the permissions on a resource",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_perm"
      ]
    },
    {
      "page": "opal.resource_perm_add",
      "title": "Add or update a permission on a resource",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_perm_add"
      ]
    },
    {
      "page": "opal.resource_perm_delete",
      "title": "Delete a permission from a resource",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resource_perm_delete"
      ]
    },
    {
      "page": "opal.resource_view_create",
      "title": "Create an Opal view over a resource reference",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.resource_view_create"
      ]
    },
    {
      "page": "opal.resource_view_reconnect",
      "title": "Reconnect an Opal view to its underlying resource",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.resource_view_reconnect"
      ]
    },
    {
      "page": "opal.resources",
      "title": "Get the resource references of a project",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resources"
      ]
    },
    {
      "page": "opal.resources_perm",
      "title": "Get the permissions on any resource",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resources_perm"
      ]
    },
    {
      "page": "opal.resources_perm_add",
      "title": "Add or update a permission on any resource",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resources_perm_add"
      ]
    },
    {
      "page": "opal.resources_perm_delete",
      "title": "Delete a permission from any resource",
      "concept": [
        "resource functions"
      ],
      "topics": [
        "opal.resources_perm_delete"
      ]
    },
    {
      "page": "opal.rm",
      "title": "Remove a R symbol (deprecated)",
      "concept": [
        "symbol functions"
      ],
      "topics": [
        "opal.rm"
      ]
    },
    {
      "page": "opal.session",
      "title": "Create the R session",
      "concept": [
        "session functions"
      ],
      "topics": [
        "opal.session"
      ]
    },
    {
      "page": "opal.session_delete",
      "title": "Delete the R session",
      "concept": [
        "session functions"
      ],
      "topics": [
        "opal.session_delete"
      ]
    },
    {
      "page": "opal.session_events",
      "title": "Get the events associated to the R session",
      "concept": [
        "session functions"
      ],
      "topics": [
        "opal.session_events"
      ]
    },
    {
      "page": "opal.session_exists",
      "title": "Check if the R session exists",
      "concept": [
        "session functions"
      ],
      "topics": [
        "opal.session_exists"
      ]
    },
    {
      "page": "opal.session_get",
      "title": "Get the R session",
      "concept": [
        "session functions"
      ],
      "topics": [
        "opal.session_get"
      ]
    },
    {
      "page": "opal.session_running",
      "title": "Check if the R session is running",
      "concept": [
        "session functions"
      ],
      "topics": [
        "opal.session_running"
      ]
    },
    {
      "page": "opal.sql",
      "title": "Execute a SQL query on tables",
      "topics": [
        "opal.sql"
      ]
    },
    {
      "page": "opal.sql_history",
      "title": "SQL query execution history",
      "topics": [
        "opal.sql_history"
      ]
    },
    {
      "page": "opal.symbol_import",
      "title": "Import a tibble",
      "concept": [
        "symbol functions"
      ],
      "topics": [
        "opal.symbol_import"
      ]
    },
    {
      "page": "opal.symbol_rm",
      "title": "Remove a R symbol",
      "concept": [
        "symbol functions"
      ],
      "topics": [
        "opal.symbol_rm"
      ]
    },
    {
      "page": "opal.symbol_save",
      "title": "Save a tibble",
      "concept": [
        "symbol functions"
      ],
      "topics": [
        "opal.symbol_save"
      ]
    },
    {
      "page": "opal.symbols",
      "title": "List R symbols",
      "concept": [
        "symbol functions"
      ],
      "topics": [
        "opal.symbols"
      ]
    },
    {
      "page": "opal.table",
      "title": "Get a table of a datasource",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.table"
      ]
    },
    {
      "page": "opal.table_create",
      "title": "Create an Opal table or view",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_create"
      ]
    },
    {
      "page": "opal.table_delete",
      "title": "Delete a Opal table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_delete"
      ]
    },
    {
      "page": "opal.table_dictionary_get",
      "title": "Get the dictionary of a Opal table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_dictionary_get"
      ]
    },
    {
      "page": "opal.table_dictionary_update",
      "title": "Update the dictionary of a Opal table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_dictionary_update"
      ]
    },
    {
      "page": "opal.table_exists",
      "title": "Check a Opal table exists",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_exists"
      ]
    },
    {
      "page": "opal.table_export",
      "title": "Export a table as a file",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_export"
      ]
    },
    {
      "page": "opal.table_get",
      "title": "Get a Opal table as a tibble",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_get"
      ]
    },
    {
      "page": "opal.table_import",
      "title": "Import a file as table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_import"
      ]
    },
    {
      "page": "opal.table_perm",
      "title": "Get the permissions on a table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_perm"
      ]
    },
    {
      "page": "opal.table_perm_add",
      "title": "Add or update a permission on a table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_perm_add"
      ]
    },
    {
      "page": "opal.table_perm_delete",
      "title": "Delete a permission from a table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_perm_delete"
      ]
    },
    {
      "page": "opal.table_save",
      "title": "Save a local tibble as a Opal table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_save"
      ]
    },
    {
      "page": "opal.table_truncate",
      "title": "Truncate a Opal table",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_truncate"
      ]
    },
    {
      "page": "opal.table_view_create",
      "title": "Create an Opal view over tables",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_view_create"
      ]
    },
    {
      "page": "opal.table_view_update",
      "title": "Update the table references and the entity filter of an Opal view",
      "concept": [
        "table functions"
      ],
      "topics": [
        "opal.table_view_update"
      ]
    },
    {
      "page": "opal.tables",
      "title": "Get tables of a datasource",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.tables"
      ]
    },
    {
      "page": "opal.tables_perm",
      "title": "Get the permissions on any table of a project",
      "topics": [
        "opal.tables_perm"
      ]
    },
    {
      "page": "opal.tables_perm_add",
      "title": "Add or update a permission on any table of a project",
      "topics": [
        "opal.tables_perm_add"
      ]
    },
    {
      "page": "opal.tables_perm_delete",
      "title": "Delete a permission from any table of a project",
      "topics": [
        "opal.tables_perm_delete"
      ]
    },
    {
      "page": "opal.task",
      "title": "Get a task",
      "concept": [
        "task functions"
      ],
      "topics": [
        "opal.task"
      ]
    },
    {
      "page": "opal.task_cancel",
      "title": "Cancel a task",
      "concept": [
        "task functions"
      ],
      "topics": [
        "opal.task_cancel"
      ]
    },
    {
      "page": "opal.task_delete",
      "title": "Delete a task",
      "concept": [
        "task functions"
      ],
      "topics": [
        "opal.task_delete"
      ]
    },
    {
      "page": "opal.task_wait",
      "title": "Wait for a task to complete or anticipate its cancellation.",
      "concept": [
        "task functions"
      ],
      "topics": [
        "opal.task_wait"
      ]
    },
    {
      "page": "opal.tasks",
      "title": "Get the tasks",
      "concept": [
        "task functions"
      ],
      "topics": [
        "opal.tasks"
      ]
    },
    {
      "page": "opal.taxonomies",
      "title": "Get taxonomies",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.taxonomies"
      ]
    },
    {
      "page": "opal.taxonomy",
      "title": "Get a taxonomy",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.taxonomy"
      ]
    },
    {
      "page": "opal.taxonomy_delete",
      "title": "Delete a taxonomy",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.taxonomy_delete"
      ]
    },
    {
      "page": "opal.taxonomy_download",
      "title": "Download a taxonomy file",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.taxonomy_download"
      ]
    },
    {
      "page": "opal.taxonomy_upload",
      "title": "Upload a taxonomy file",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.taxonomy_upload"
      ]
    },
    {
      "page": "opal.terms",
      "title": "Get the terms of a vocabulary",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.terms"
      ]
    },
    {
      "page": "opal.token",
      "title": "Get a personal access token",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.token"
      ]
    },
    {
      "page": "opal.token_datashield_create",
      "title": "Create a personal access token for Datashield usage",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.token_datashield_create"
      ]
    },
    {
      "page": "opal.token_delete",
      "title": "Delete a personal access token",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.token_delete"
      ]
    },
    {
      "page": "opal.token_r_create",
      "title": "Create a personal access token for R usage",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.token_r_create"
      ]
    },
    {
      "page": "opal.token_renew",
      "title": "Renew an inactive personal access token",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.token_renew"
      ]
    },
    {
      "page": "opal.token_sql_create",
      "title": "Create a personal access token for SQL usage",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.token_sql_create"
      ]
    },
    {
      "page": "opal.tokens",
      "title": "Get the personal access tokens",
      "concept": [
        "token functions"
      ],
      "topics": [
        "opal.tokens"
      ]
    },
    {
      "page": "opal.unload_package",
      "title": "Unload package",
      "concept": [
        "execution functions"
      ],
      "topics": [
        "opal.unload_package"
      ]
    },
    {
      "page": "opal.valueset",
      "title": "Get the values of an entity",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.valueset"
      ]
    },
    {
      "page": "opal.variable",
      "title": "Get a variable of a table",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.variable"
      ]
    },
    {
      "page": "opal.variable_summary",
      "title": "Get summary statistics of a variable of a table",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.variable_summary"
      ]
    },
    {
      "page": "opal.variables",
      "title": "Get variables of a table",
      "concept": [
        "datasource functions"
      ],
      "topics": [
        "opal.variables"
      ]
    },
    {
      "page": "opal.version_compare",
      "title": "Compare",
      "topics": [
        "opal.version_compare"
      ]
    },
    {
      "page": "opal.vocabularies",
      "title": "Get the vocabularies of a taxonomy",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.vocabularies"
      ]
    },
    {
      "page": "opal.vocabulary",
      "title": "Get a taxonomy vocabulary",
      "concept": [
        "taxonomy functions"
      ],
      "topics": [
        "opal.vocabulary"
      ]
    },
    {
      "page": "opal.workspace_restore",
      "title": "Restore a R workspace from a opal.",
      "concept": [
        "workspace functions"
      ],
      "topics": [
        "opal.workspace_restore"
      ]
    },
    {
      "page": "opal.workspace_rm",
      "title": "Remove a R workspace from a opal.",
      "concept": [
        "workspace functions"
      ],
      "topics": [
        "opal.workspace_rm"
      ]
    },
    {
      "page": "opal.workspace_save",
      "title": "Save the current session in a opal R workspace.",
      "concept": [
        "workspace functions"
      ],
      "topics": [
        "opal.workspace_save"
      ]
    },
    {
      "page": "opal.workspaces",
      "title": "Get the R workspaces from a opal.",
      "concept": [
        "workspace functions"
      ],
      "topics": [
        "opal.workspaces"
      ]
    }
  ],
  "_readme": "https://github.com/obiba/opalr/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "bit",
    "bit64",
    "cli",
    "clipr",
    "cpp11",
    "crayon",
    "curl",
    "dplyr",
    "forcats",
    "generics",
    "glue",
    "haven",
    "hms",
    "httr",
    "jsonlite",
    "labelled",
    "lifecycle",
    "magrittr",
    "mime",
    "openssl",
    "pillar",
    "pkgconfig",
    "prettyunits",
    "progress",
    "purrr",
    "R6",
    "readr",
    "rlang",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tzdb",
    "utf8",
    "vctrs",
    "vroom",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "datashield-admin.Rmd",
      "filename": "datashield-admin.html",
      "title": "DataSHIELD Administration",
      "author": "Yannick Marcon",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "R Packages",
        "Profiles",
        "Settings",
        "Methods",
        "Options",
        "R Parser",
        "Users and Permissions",
        "Users",
        "Permissions",
        "Teardown"
      ],
      "created": "2021-06-30 17:14:07",
      "modified": "2021-06-30 20:27:37",
      "commits": 2
    },
    {
      "source": "opal-files.Rmd",
      "filename": "opal-files.html",
      "title": "Opal Files",
      "author": "Yannick Marcon",
      "engine": "knitr::rmarkdown",
      "headings": [],
      "created": "2017-02-09 09:22:23",
      "modified": "2021-06-30 17:14:07",
      "commits": 9
    },
    {
      "source": "opal-projects.Rmd",
      "filename": "opal-projects.html",
      "title": "Opal Projects",
      "author": "Yannick Marcon",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Project",
        "Backup and Restore",
        "Tables",
        "Dictionaries",
        "Values",
        "Annotations",
        "Resources",
        "Permissions",
        "Teardown"
      ],
      "created": "2019-02-05 13:53:23",
      "modified": "2021-07-01 09:07:26",
      "commits": 8
    },
    {
      "source": "opal-rsession.Rmd",
      "filename": "opal-rsession.html",
      "title": "Opal R Session",
      "author": "Yannick Marcon",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Assign",
        "Execute",
        "Files",
        "Workspace",
        "Teardown"
      ],
      "created": "2019-02-05 13:53:23",
      "modified": "2021-07-01 09:27:51",
      "commits": 6
    }
  ],
  "_score": 8.662833354589669,
  "_indexed": true,
  "_nocasepkg": "opalr",
  "_universes": [
    "obiba",
    "ymarcon"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.6.1",
      "date": "2026-05-27T11:03:18.000Z",
      "distro": "noble",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "d25fda17824d75127645a6dd5491226b3fdfbfac5ae863765f3546e1f1fdf60c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "3.6.1",
      "date": "2026-05-27T11:04:59.000Z",
      "distro": "noble",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "7b220ad80c72cccb66c0b5933fee58359579cf2e1db81ad63ead06ad105f6753",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.6.1",
      "date": "2026-05-27T11:02:32.000Z",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "90d6e1eb82ff42949dc1f86b1f78a7c1d69883716537339c4109072e8c1e1a8e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "3.6.1",
      "date": "2026-05-27T11:02:47.000Z",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "5a56215564deabb4093c72a54147390bfa7031cb6b8821acd05bc9ce86530a35",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.6.1",
      "date": "2026-05-27T11:03:11.000Z",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "1d621961a3026edd007ee027f3e427fd7433f5aaaa558d3039ab4758e4de24ef",
      "status": "success",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.6.1",
      "date": "2026-05-27T11:02:30.000Z",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "a2eee0e32ca9becfc520a94ce9641f6f594970426e66594d461b146186e4f519",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.6.1",
      "date": "2026-05-27T11:02:23.000Z",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "d9cbc7b51cdb49c69f167b0e71a095c3f8bfd2342cf30ea8365c29f76b4b0466",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "3.6.1",
      "date": "2026-05-27T11:02:24.000Z",
      "commit": "0a7f19ea887f49dd06aa34dbfbdce1c75881f5b4",
      "fileid": "bcfd6e03bbc7bc0f36473ea52fc16fc690d958ed6bc7eb90ff71d9f12d53a4b8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/obiba/actions/runs/26507038811"
    }
  ]
}